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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC005064.40 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 374aa MW: 41286 Da PI: 4.8533 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104.5 | 6.1e-33 | 176 | 230 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpe He+Fveav+qLGGs++AtPk +l+lm+v+gLt++hvkSHLQkYR+ EcC005064.40 176 KARMRWTPEHHEAFVEAVNQLGGSDRATPKGVLKLMNVEGLTIYHVKSHLQKYRT 230 68****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.82 | 173 | 233 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.9E-31 | 174 | 232 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.79E-18 | 174 | 230 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.9E-24 | 176 | 230 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.1E-9 | 178 | 229 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 2.9E-22 | 263 | 309 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 374 aa Download sequence Send to blast |
VTQMLFKNGT VGSGLSSASG CTSDICFSSP QQPERHAQYS PFISPASVIR TSTPPIGFPR 60 TEVQATALTD IPKESKDVLW DPNQLQDFLY SENVPSQNVQ LESRGAVVGC DNQSAGSDLI 120 WTENFGEAMD LDWSKFLADD DAIEPSKPPL AVQGQSLPPA ESSAAANQLS SAPSSKARMR 180 WTPEHHEAFV EAVNQLGGSD RATPKGVLKL MNVEGLTIYH VKSHLQKYRT ARYKPDSAES 240 EGSSEKKLSS LEDMKSLDLK ATMNITEALR MQMEVQKQLH EQLEIQRKLQ LRIEEQGRCL 300 QMLFEKQRNQ TEATEQPEAE KGLETTNPSS SPGESSLNMN KRQKVSEART TDDDNPDEGE 360 MGLPSPKRVR GHEP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010043308.1 | 0.0 | PREDICTED: protein PHR1-LIKE 1 isoform X1 | ||||
Swissprot | Q8GUN5 | 1e-72 | PHL1_ARATH; Protein PHR1-LIKE 1 | ||||
TrEMBL | A0A059D520 | 0.0 | A0A059D520_EUCGR; Uncharacterized protein | ||||
STRING | POPTR_0019s03750.1 | 1e-96 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G29000.3 | 9e-61 | G2-like family protein |